Professor Michele Vendruscolo

Michele Vendruscolo

University position

Professor

Professor Michele Vendruscolo is pleased to consider applications from prospective PhD students.

Departments

Department of Chemistry

Email

mv245@cam.ac.uk

Home page

http://www-vendruscolo.ch.cam.ac.uk/index.html

Research Theme

Systems and Computational Neuroscience

Interests

My research is aimed at taking full advantage of an approach that exploits effectively the synergy between experiment and theory in order to advance towards a full characterisation of the process of protein aggregation.

We have developed a method (http://www-vendruscolo.ch.cam.ac.uk/zyggregator.php) based on the simple physico-chemical characteristics of the amino acids, that enables predictions to be made about several aspects of the process of peptide and protein aggregation.

We are using this approach to investigate a model of Alzheimer’s disease based on the expression of the Abeta peptide in Drosophila melanogaster as an “in vivo test tube” in which to probe the molecular determinants of protein aggregation and its biological consequences.

We also have recently revealed a very close connection between two important but distinct aspects of the behaviour of proteins in the cell - their aggregation propensities and the expression levels of the corresponding genes

Correlation between mRNA expression levels and the measured aggregation rates of the corresponding proteins.
Correlation between mRNA expression levels and the measured aggregation rates of the corresponding proteins.
Click image to view full-size

Research Focus

Keywords

amyloid

protein aggregation

computational methods

Clinical conditions

Alzheimer's disease

Equipment

Computational modelling

Collaborators

Cambridge

Damian Crowther

Christopher Dobson

David Lomas

International

Fabrizio Chiti Web: http://www.fabriziochiti.it/

Key publications

Tartaglia GG, Pechmann S, Dobson CM and Vendruscolo M (2007), “Life on the Edge: A link between gene expression levels and aggregation rates of human proteins” Trends Biochem Sci 32:204-206 Details

Pawar AP, DuBay KF, Zurdo J, Chiti F, Vendruscolo M and Dobson CM (2005), “Prediction of aggregation-prone and aggregation-susceptibl regions in proteins associated with neurodegenerative diseases” J Mol Biol 350:379-392 Details

DuBay KF, Pawar AP, Chiti F, Zurdo J, Dobson CM and Vendruscolo M (2004), “Prediction of the absolute aggregation rates of amyloidogenic polypeptide chains” J Mol Biol 341:1317-1326 Details